Maize single cell

Author: kuqd

August undefined, 2024

WebApr 1, 2024 · Synergetic elongation of mesocotyl and coleoptile are crucial in governing maize seedlings emergence, especially for the maize sown in deep soil. Studying the genomic regions controlling maize deep-sowing tolerance would aid the development of new varieties that are resistant to harsh conditions, such as drought and low temperature … WebMay 7, 2024 · In the team’s study, published in Cell, the researchers focused on maize, creating a reference atlas of 52 cell types, more than 30 of which had never been described at a molecular level previously. Single-cell sequencing, which captures cells in between different states, allowed them to reconstruct their developmental history, delineating ...

Gametophyte genome activation occurs at pollen mitosis I in maize

WebSingle-cell RNA sequencing of developing maize ears facilitates functional analysis and trait candidate gene discovery Highlights • scRNA-seq of developing maize ears reveals … WebXu et al. construct and validate a single-cell transcriptomic atlas of developing maize ears. Their single-cell gene co-expression networks will facilitate developmental genetics studies by predicting genetic redundancy and revealing transcriptional regulatory networks. Their results also inform maize breeding by identifying candidate trait-associated genes. boss who doesn\u0027t care

Unraveling Root Development Through Single-Cell Omics and ...

WebApr 6, 2024 · Here, we present a single-cell RNA (scRNA) sequencing and chromatin accessibility survey of rice radicles. By temporal profiling of individual root tip cells we reconstruct continuous... WebFurthermore, various single-cell omics studies have highlighted the importance of epigenomic regulation in processes such as cell immune responses in human T cells (Satpathy et al., 2024) and cell differentiation in maize (Zea mays) (Satterlee et al., 2024). The same techniques should also provide new dimensions to genome regulation … hawken tobacco products

(PDF) Plant stem-cell organization and differentiation at single-cell ...

Single nucleus sequencing reveals spermatid chromosome fragmentat…

WebOct 18, 2024 · Single-cell genomics has moved beyond model systems into crops, including maize and rice, with new understanding of tissue-level expression and accessibility. New technologies in other systems give us hope that plant biologists can both increase the number of cells assayed in single-cell experiments and decrease the cost to assay … WebSep 27, 2024 · We describe 92 distinct states of chromatin accessibility across more than 165,913 putative CREs, 56,575 cells, and 52 known cell-types in maize using a novel implementation of regularized ... boss wessing reviewWebTable 1: Maize Genes Studied by Barbara McClintock. Dominant allele on the short arm of chromosome 9 that prevents color from being expressed in the aleurone layer of the maize kernel, causing a ... boss white hemp

"WebMay 4, 2024 · Recently, single-cell RNA-seq (scRNA-seq) studies have addressed the specification of tissues from stem cells in the primary root. scRNA-seq studies are anticipated to be a useful approach to decipher cell fate specification and patterning during LR formation. ... Evidence for phloem loading via the abaxial bundle sheath cells in … " - Maize single cell

Maize single cell

Barbara McClintock and the Discovery of Jumping Genes ... - Nature

WebNational Center for Biotechnology Information WebFeb 22, 2024 · To generate a single-cell atlas from developing maize ears, we used the 5–10 mm stage, where major developmental and architectural decisions, including …

Did you know?

WebDec 2, 2024 · The layered effect: A single-cell map of corn’s root reveals a regulator of cellular diversity: In assembling cellular jigsaw puzzle, researchers uncover genetic instructions for cell types... WebNov 12, 2015 · Centromeric chromatin contains the histone H3 variant cenH3 (CENP-A in humans, CENH3 in maize)—a defining feature of centromeres (Henikoff et al. 2001).While this H3 variant makes up only a small percentage of the total H3 population in centromeres (Fukagawa and Earnshaw 2014), it plays a central role in recruiting other centromere …

WebOct 11, 2024 · Implementing single cell RNA-seq of maize leaf protoplasts transiently expressing anther transcription factors is a new approach to organizing regulatory hierarchies for maize somatic anther cells 10.1111/tpj.16045. 2 new studies on 24-nt phasiRNA Two published studies established new aspects of 24-nt phasiRNA biology. WebApr 5, 2024 · Using single-cell RNA sequencing, we reconstructed the developmental program into maize male meiosis. A smooth continuum of expression stages before …

WebJan 27, 2024 · Nelms and Walbot sequenced RNA content of single maize pollen precursor cells and grains through the 26 days from the beginning of meiosis to pollen shed. … Webin cell protection and inhibition of cell death.10 In addition to the 13-LOX jasmonate pathway, 9-LOX genes also function in plant development and plant-biotic interac-tions. Speciﬁc 9-LOXs have been shown to inﬂuence cell death,11,12,13 root growth,14 senescence,15 and to promote either susceptibility16 or resistance17,15,18 to pathogens ...

WebJan 7, 2024 · Although single-cell RNA sequencing was successfully used to identify the transcriptomes of vascular cells in Arabidopsis (Kim et al., 2024), the suberin–lignin barrier surrounding the BS of maize leaves prevented access to vascular cell transcriptomes in maize. With our optimized protocol, BSCs were released and could be identified based …

WebDec 1, 2024 · Single-cell RNA sequencing reveals the landscape of maize root tips and assists in identification of cell type-specific nitrate-response genes 1. Introduction. … boss wheels norfolk vaWebDec 14, 2024 · These single-cell transcriptomic analyses of the shoot apex yield insight into the processes of stem-cell function and cell-fate acquisition in the maize … boss wetalk hooded tracksuitWebPubMed boss when you fight him memeWebDec 3, 2024 · Here, we used single-cell RNA sequencing to rapidly generate a cell-resolution map of the maize root, revealing an alternative configuration of the tissue formative transcription factor SHORT-ROOT (SHR) adjacent to an expanded cortex. We show that maize SHR protein is hypermobile, moving at least eight cell layers into the … boss white trainers menWebMaize brown midrib (bm) mutants associated with impaired lignin biosynthesis are a potential source for the breed of novel germplasms with improved cell wall digestibility. ... Furthermore, five 4CLs were retrieved from maize genome, and Zm4CL1 was the most highly expressed one in the lignified tissues. Mutation of Zm4CL1 mainly impeded the ... boss westfield white cityWebDec 29, 2024 · These single-cell transcriptomic analyses of the shoot apex yield insight into the processes of stem-cell function and cell-fate acquisition in the maize seedling and … boss white rusham trainersWebMaize Single Cell Cis Regulatory Atlas. This repository contains scripts used in the analysis of maize scATAC-seq atlas data. Scripts are provided as is. However, there may be an effort in the future to translate this code into an R package for streamlined analysis depending on demand. Users should be aware that the majority of this code was ... boss white coshh data sheet